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In 6.6.0-20081015, on the initial panel of the ‘Hibernate Reverse Engineering’ dialog, the radio button option ‘Add Hibernate mapping Annotations to POJO’ is not sticky.
It appears that this option is not saved into .myhibernatedata.
Sorry for the delay in responding, when selecting Hibernate Reverse Engineering from the MyEclipse Database Explorer or MyEclipse Hibernate perspectives, all options are saved, but the Create POJO<>DB Table mapping information radio button is always set back to ‘Create a Hibernate mapping file’ even though ‘Add Hibernate mapping annotations’ was selected on the previous generation.